* using log directory 'd:/Rcompile/CRANpkg/local/3.3/AIM.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'AIM/DESCRIPTION' ... OK * this is package 'AIM' version '1.01' * checking package namespace information ... NOTE Namespace with empty importFrom: 'survival' * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'AIM' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. Package listed in more than one of Depends, Imports, Suggests, Enhances: 'survival' A package should be listed in only one of these fields. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE backfit.cox.interaction: no visible global function definition for 'coxph' backfit.lm.interaction: no visible global function definition for 'lm' backfit.logistic.interaction: no visible global function definition for 'glm' backfit.logistic.main: no visible global function definition for 'glm' cox.interaction: no visible global function definition for 'coxph' cv.cox.interaction: no visible global function definition for 'coxph' cv.cox.main: no visible global function definition for 'coxph' cv.lm.interaction: no visible global function definition for 'lm' cv.lm.main: no visible global function definition for 'lm' cv.logistic.interaction: no visible global function definition for 'glm' cv.logistic.main: no visible global function definition for 'glm' lm.interaction: no visible global function definition for 'lm' logistic.interaction: no visible global function definition for 'glm' logistic.main: no visible global function definition for 'glm' Undefined global functions or variables: coxph glm lm Consider adding importFrom("stats", "glm", "lm") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [47s] OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs