* using log directory 'd:/Rcompile/CRANpkg/local/3.3/AdaptFit.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'AdaptFit/DESCRIPTION' ... OK * this is package 'AdaptFit' version '0.2-2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'AdaptFit' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' calls to packages already attached by Depends: 'MASS' 'SemiPar' 'nlme' Please remove these calls from your code. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE asp: no visible global function definition for 'as.formula' asp: no visible global function definition for 'var' aspm: no visible binding for global variable 'X.Declan' aspm: no visible binding for global variable 'Z.Jaida' aspm: no visible binding for global variable 'group.vec.Handan' aspm: no visible global function definition for 'as.formula' aspm: no visible global function definition for 'glm' aspm: no visible global function definition for 'binomial' aspm: no visible global function definition for 'poisson' Undefined global functions or variables: X.Declan Z.Jaida as.formula binomial glm group.vec.Handan poisson var Consider adding importFrom("stats", "as.formula", "binomial", "glm", "poisson", "var") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [24s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs