* using log directory 'd:/Rcompile/CRANpkg/local/3.3/CCpop.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'CCpop/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'CCpop' version '1.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'CCpop' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .my.chisq.test.2d: no visible global function definition for 'pchisq' .my.chisq.test.3d: no visible global function definition for 'pchisq' .my.g.test.2d: no visible global function definition for 'pchisq' .my.g.test.3d: no visible global function definition for 'pchisq' conditional.assoc.test.pure.pop.hwe.le.kpy: no visible global function definition for 'pchisq' marginal.assoc.test.hwe.in.controls: no visible global function definition for 'pchisq' marginal.assoc.test.kpx.kpy: no visible global function definition for 'constrOptim' marginal.assoc.test.kpx.kpy: no visible global function definition for 'pchisq' marginal.assoc.test.pop.hwe.kpy: no visible global function definition for 'pchisq' marginal.assoc.test.unconstrained.chisq: no visible global function definition for 'pchisq' marginal.assoc.test.unconstrained.gsq: no visible global function definition for 'pchisq' pairwise.assoc.test.hwe.le.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.kpx.kpy: no visible global function definition for 'constrOptim' pairwise.assoc.test.kpx.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.pop.hwe.le.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.pop.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.pure.pop.hwe.le.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.pure.pop.kpy: no visible global function definition for 'pchisq' pairwise.assoc.test.pure.unconstrained: no visible global function definition for 'anova' pairwise.assoc.test.pure.unconstrained: no visible global function definition for 'glm' pairwise.assoc.test.pure.unconstrained: no visible binding for global variable 'binomial' Undefined global functions or variables: anova binomial constrOptim glm pchisq Consider adding importFrom("stats", "anova", "binomial", "constrOptim", "glm", "pchisq") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [1s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE