* using log directory 'd:/Rcompile/CRANpkg/local/3.3/GANPA.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'GANPA/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'GANPA' version '1.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'GANPA' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Package in Depends field not imported from: 'GANPAdata' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE prepare_Rd: GANPA-package.Rd:30: Dropping empty section \seealso prepare_Rd: GANPA-package.Rd:31: Dropping empty section \examples prepare_Rd: GSE.Test.Main.Rd:24: Dropping empty section \details prepare_Rd: GSE.Test.Main.Rd:32: Dropping empty section \note prepare_Rd: GSE.Test.Main.Rd:33: Dropping empty section \seealso prepare_Rd: weight.gsets.test.Rd:14: Dropping empty section \details prepare_Rd: weight.gsets.test.Rd:25: Dropping empty section \note prepare_Rd: weight.gsets.with.msprot.Rd:17: Dropping empty section \details prepare_Rd: weight.gsets.with.msprot.Rd:27: Dropping empty section \note prepare_Rd: weight.gsets.with.msprot.Rd:31: Dropping empty section \examples * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [0s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs