* using log directory 'd:/Rcompile/CRANpkg/local/3.3/GPLTR.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'GPLTR/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'GPLTR' version '1.2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'GPLTR' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .VARIMPPERM: no visible global function definition for 'predict' .logistic.eval: no visible global function definition for 'glm' .logistic.eval: no visible binding for global variable 'binomial' .logistic.split: no visible global function definition for 'glm' .logistic.split: no visible binding for global variable 'binomial' .logistic.split: no visible global function definition for 'runif' bagging.pltr : : no visible global function definition for 'predict.glm' best.tree.BIC.AIC : : no visible global function definition for 'as.formula' best.tree.BIC.AIC : : no visible global function definition for 'glm' best.tree.BIC.AIC : : no visible global function definition for 'deviance' best.tree.BIC.AIC: no visible global function definition for 'glm' best.tree.BIC.AIC: no visible global function definition for 'as.formula' best.tree.BIC.AIC: no visible global function definition for 'deviance' best.tree.CV: no visible global function definition for 'glm' best.tree.CV: no visible global function definition for 'as.formula' best.tree.CV: no visible global function definition for 'predict.glm' best.tree.CV : : no visible global function definition for 'predict.glm' best.tree.bootstrap: no visible global function definition for 'glm' best.tree.bootstrap: no visible global function definition for 'as.formula' best.tree.bootstrap : : no visible global function definition for 'rnorm' best.tree.permute: no visible global function definition for 'glm' best.tree.permute: no visible global function definition for 'as.formula' nested.trees: no visible global function definition for 'glm' nested.trees: no visible global function definition for 'as.formula' nested.trees: no visible global function definition for 'deviance' p.val.tree: no visible global function definition for 'glm' p.val.tree: no visible global function definition for 'as.formula' p.val.tree : : no visible global function definition for 'rnorm' p.val.tree: no visible binding for global variable 'var' p.val.tree: no visible global function definition for 'pchisq' pltr.glm: no visible global function definition for 'glm' pltr.glm: no visible global function definition for 'as.formula' predict_bagg.pltr : : no visible global function definition for 'predict.glm' predict_pltr: no visible global function definition for 'predict.glm' tree2glm: no visible global function definition for 'as.formula' tree2glm: no visible global function definition for 'glm' Undefined global functions or variables: as.formula binomial deviance glm pchisq predict predict.glm rnorm runif var Consider adding importFrom("stats", "as.formula", "binomial", "deviance", "glm", "pchisq", "predict", "predict.glm", "rnorm", "runif", "var") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [12s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [211s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE