* using log directory 'd:/Rcompile/CRANpkg/local/3.3/ICGE.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'ICGE/DESCRIPTION' ... OK * this is package 'ICGE' version '0.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ICGE' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE INCAncinner : dian: no visible global function definition for 'cutree' INCAncinner : bestela: no visible global function definition for 'cutree' center: no visible global function definition for 'var' dbhatta: no visible global function definition for 'as.dist' dcor: no visible global function definition for 'cor' dcor: no visible global function definition for 'as.dist' dgower: no visible global function definition for 'as.dist' dmahal: no visible global function definition for 'as.dist' dproc2: no visible global function definition for 'as.dist' plot.incaix: no visible global function definition for 'barplot' plot.incanc: no visible global function definition for 'plot' plot.incanc: no visible global function definition for 'lines' plot.incanc: no visible global function definition for 'legend' selectioncluster : dian: no visible global function definition for 'cutree' selectioncluster : bestela: no visible global function definition for 'cutree' Undefined global functions or variables: as.dist barplot cor cutree legend lines plot var Consider adding importFrom("graphics", "barplot", "legend", "lines", "plot") importFrom("stats", "as.dist", "cor", "cutree", "var") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [2s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE