* using log directory 'd:/Rcompile/CRANpkg/local/3.3/InPosition.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'InPosition/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'InPosition' version '0.12.7' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'InPosition' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Packages in Depends field not imported from: 'ExPosition' 'prettyGraphs' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE boot.compute.fj: no visible global function definition for 'supplementaryCols' caChiTest: no visible global function definition for 'pchisq' caChiTest: no visible global function definition for 'pnorm' epCA.inference.battery : permute.components.ca: no visible global function definition for 'epCA' epCA.inference.battery: no visible global function definition for 'epCA' epCA.inference.battery: no visible global function definition for 'txtProgressBar' epCA.inference.battery: no visible global function definition for 'setTxtProgressBar' epGPCA.inference.battery : permute.components.pca: no visible global function definition for 'epGPCA' epGPCA.inference.battery: no visible global function definition for 'epGPCA' epGPCA.inference.battery: no visible global function definition for 'txtProgressBar' epGPCA.inference.battery: no visible global function definition for 'setTxtProgressBar' epMCA.inference.battery : permute.components.mca: no visible global function definition for 'epMCA' epMCA.inference.battery: no visible global function definition for 'makeNominalData' epMCA.inference.battery: no visible global function definition for 'epMCA' epMCA.inference.battery: no visible global function definition for 'txtProgressBar' epMCA.inference.battery: no visible global function definition for 'setTxtProgressBar' epPCA.inference.battery : permute.components.pca: no visible global function definition for 'epPCA' epPCA.inference.battery: no visible global function definition for 'epPCA' epPCA.inference.battery: no visible global function definition for 'txtProgressBar' epPCA.inference.battery: no visible global function definition for 'setTxtProgressBar' inGraphs: no visible global function definition for 'createColorVectorsByDesign' inGraphs: no visible global function definition for 'calculateConstraints' inGraphs: no visible global function definition for 'prettyPlot' inGraphs: no visible global function definition for 'prettyBars' Undefined global functions or variables: calculateConstraints createColorVectorsByDesign epCA epGPCA epMCA epPCA makeNominalData pchisq pnorm prettyBars prettyPlot setTxtProgressBar supplementaryCols txtProgressBar Consider adding importFrom("stats", "pchisq", "pnorm") importFrom("utils", "setTxtProgressBar", "txtProgressBar") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [14s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs