* using log directory 'd:/Rcompile/CRANpkg/local/3.3/SMC.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'SMC/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'SMC' version '1.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'SMC' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE File 'SMC/R/zzz.R': .onLoad calls: packageStartupMessage("##\n", "## Sequential Monte Carlo Package (SMC)\n", "##\n", "## Functionality: sequential Monte Carlo (SMC) or sequential importance\n", "## sampling (SIS) or hidden Markov models (HMM), particle filter (PF)\n", "## and auxiliary particle filter (APF)\n", "##\n", "## Use: \"help(package = SMC)\" at the R prompt for more info\n", "##\n", "## Copyright (C) 2006-", this.year, " Gopi Goswami\n", "##\n", "## Created by: Gopi Goswami \n", "## Maintained by: Gopi Goswami \n", "##\n") See section 'Good practice' in '?.onAttach'. .MHUpdateFuncGen.PF : MHUpdateFunc: no visible global function definition for 'runif' MarkovSwitchingFuncGenerator : generateNextStreamsFunc: no visible global function definition for 'runif' MarkovSwitchingFuncGenerator: no visible global function definition for 'rnorm' MarkovSwitchingFuncGenerator: no visible global function definition for 'runif' MarkovSwitchingFuncGenerator : logObsDensFunc: no visible global function definition for 'dnorm' MarkovSwitchingFuncGenerator : propagateFunc: no visible global function definition for 'dnorm' MarkovSwitchingFuncGenerator : propagateFunc: no visible global function definition for 'runif' Undefined global functions or variables: dnorm rnorm runif Consider adding importFrom("stats", "dnorm", "rnorm", "runif") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [13s] OK ** running examples for arch 'x64' ... [17s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs