* using log directory 'd:/Rcompile/CRANpkg/local/3.3/SynergizeR.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'SynergizeR/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'SynergizeR' version '0.2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'SynergizeR' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Packages in Depends field not imported from: 'RCurl' 'RJSONIO' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE File 'SynergizeR/R/zzz.r': .onLoad calls: packageStartupMessage("\nSynergizeR\n", appendLF = TRUE) packageStartupMessage("IMPORTANT: The Synergizer has been designed for bulk translation of identifiers.\nSee http://llama.mshri.on.ca/synergizer/doc/ for the details of usage. ", appendLF = TRUE) See section 'Good practice' in '?.onAttach'. available_authorities: no visible global function definition for 'getCurlHandle' available_authorities: no visible global function definition for 'curlSetOpt' available_authorities: no visible global function definition for 'basicTextGatherer' available_authorities: no visible global function definition for 'basicHeaderGatherer' available_authorities: no visible global function definition for 'curlPerform' available_authorities: no visible global function definition for 'fromJSON' available_domains: no visible global function definition for 'getCurlHandle' available_domains: no visible global function definition for 'curlSetOpt' available_domains: no visible global function definition for 'basicTextGatherer' available_domains: no visible global function definition for 'basicHeaderGatherer' available_domains: no visible global function definition for 'curlPerform' available_domains: no visible global function definition for 'fromJSON' available_ranges: no visible global function definition for 'getCurlHandle' available_ranges: no visible global function definition for 'curlSetOpt' available_ranges: no visible global function definition for 'basicTextGatherer' available_ranges: no visible global function definition for 'basicHeaderGatherer' available_ranges: no visible global function definition for 'curlPerform' available_ranges: no visible global function definition for 'fromJSON' available_species: no visible global function definition for 'getCurlHandle' available_species: no visible global function definition for 'curlSetOpt' available_species: no visible global function definition for 'basicTextGatherer' available_species: no visible global function definition for 'basicHeaderGatherer' available_species: no visible global function definition for 'curlPerform' available_species: no visible global function definition for 'fromJSON' server_version: no visible global function definition for 'getCurlHandle' server_version: no visible global function definition for 'curlSetOpt' server_version: no visible global function definition for 'basicTextGatherer' server_version: no visible global function definition for 'basicHeaderGatherer' server_version: no visible global function definition for 'curlPerform' server_version: no visible global function definition for 'fromJSON' synergizer: no visible global function definition for 'basicTextGatherer' synergizer: no visible global function definition for 'basicHeaderGatherer' synergizer: no visible global function definition for 'curlPerform' synergizer: no visible global function definition for 'getCurlHandle' synergizer: no visible global function definition for 'toJSON' synergizer: no visible global function definition for 'fromJSON' synergizer: no visible global function definition for 'write.table' Undefined global functions or variables: basicHeaderGatherer basicTextGatherer curlPerform curlSetOpt fromJSON getCurlHandle toJSON write.table Consider adding importFrom("utils", "write.table") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [1s] OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs