* using log directory 'd:/Rcompile/CRANpkg/local/3.3/adaptsmoFMRI.Rcheck'
* using R version 3.3.2 (2016-10-31)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'adaptsmoFMRI/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'adaptsmoFMRI' version '1.1'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Depends: includes the non-default packages:
  'Matrix' 'coda' 'mvtnorm' 'MCMCpack' 'spatstat' 'parallel'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'adaptsmoFMRI' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
  'MCMCpack' 'Matrix' 'coda' 'mvtnorm' 'parallel' 'spatstat'
  Please remove these calls from your code.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
adaptiveGMRF: no visible global function definition for 'as'
adaptiveGMRF: no visible global function definition for 'rnorm'
adaptiveGMRF: no visible global function definition for 'rgamma'
adaptiveGMRF: no visible global function definition for 'runif'
adaptiveGMRF: no visible global function definition for 'median'
adaptiveGMRF: no visible binding for global variable 'median'
adaptiveGMRF2COVAR: no visible global function definition for 'as'
adaptiveGMRF2COVAR: no visible global function definition for 'rnorm'
adaptiveGMRF2COVAR: no visible global function definition for 'rgamma'
adaptiveGMRF2COVAR : drawWeights.Var1: no visible global function
  definition for 'rgamma'
adaptiveGMRF2COVAR : drawWeights.Var1: no visible global function
  definition for 'runif'
adaptiveGMRF2COVAR : drawWeights.Var2: no visible global function
  definition for 'rgamma'
adaptiveGMRF2COVAR : drawWeights.Var2: no visible global function
  definition for 'runif'
adaptiveGMRF2COVAR: no visible global function definition for
  'mcparallel'
adaptiveGMRF2COVAR: no visible global function definition for
  'mccollect'
adaptiveGMRF2COVAR: no visible global function definition for 'median'
adaptiveGMRF2COVAR: no visible binding for global variable 'median'
sim.adaptiveGMRF: no visible global function definition for 'as'
sim.adaptiveGMRF: no visible global function definition for 'rnorm'
sim.adaptiveGMRF: no visible global function definition for 'rgamma'
sim.adaptiveGMRF: no visible global function definition for 'runif'
sim.adaptiveGMRF: no visible global function definition for 'median'
sim.adaptiveGMRF2COVAR: no visible global function definition for 'as'
sim.adaptiveGMRF2COVAR: no visible global function definition for
  'rnorm'
sim.adaptiveGMRF2COVAR: no visible global function definition for
  'rgamma'
sim.adaptiveGMRF2COVAR : drawWeights.Var1: no visible global function
  definition for 'rgamma'
sim.adaptiveGMRF2COVAR : drawWeights.Var1: no visible global function
  definition for 'runif'
sim.adaptiveGMRF2COVAR : drawWeights.Var2: no visible global function
  definition for 'rgamma'
sim.adaptiveGMRF2COVAR : drawWeights.Var2: no visible global function
  definition for 'runif'
sim.adaptiveGMRF2COVAR: no visible global function definition for
  'mcparallel'
sim.adaptiveGMRF2COVAR: no visible global function definition for
  'mccollect'
sim.adaptiveGMRF2COVAR: no visible global function definition for
  'median'
sim.fmri: no visible global function definition for 'as'
sim.fmri: no visible global function definition for 'rnorm'
sim.fmri2COVAR: no visible global function definition for 'as'
sim.fmri2COVAR: no visible global function definition for 'rnorm'
sim.weightsplot: no visible binding for global variable 'median'
weightsplot: no visible binding for global variable 'median'
Undefined global functions or variables:
  as mccollect mcparallel median rgamma rnorm runif
Consider adding
  importFrom("methods", "as")
  importFrom("stats", "median", "rgamma", "rnorm", "runif")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [4s] OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs