* using log directory 'd:/Rcompile/CRANpkg/local/3.3/caroline.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'caroline/DESCRIPTION' ... OK * this is package 'caroline' version '0.7.6' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'caroline' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' calls in package code: 'MASS' 'RSQLite' 'grid' 'sm' Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .ci.median: no visible global function definition for 'qbinom' .ci.median: no visible global function definition for 'median' .ci.median: no visible global function definition for 'pbinom' .description: no visible global function definition for 'var' .description: no visible global function definition for 'shapiro.test' .description: no visible global function definition for 'quantile' .huber.NR: no visible global function definition for 'median' .kurtosis: no visible global function definition for 'var' .kurtosys: no visible global function definition for 'var' .mad: no visible global function definition for 'median' .rect3venn: no visible global function definition for 'plot.new' .rect3venn: no visible global function definition for 'plot.window' .rect3venn: no visible global function definition for 'rect' .rect3venn: no visible global function definition for 'text' .rrange: no visible global function definition for 'boxplot.stats' .skewed: no visible global function definition for 'var' bestBy: no visible global function definition for 'dbConnect' bestBy: no visible global function definition for 'dbDriver' bestBy: no visible global function definition for 'dbWriteTable' bestBy: no visible global function definition for 'dbGetQuery' dbWriteTable2: no visible global function definition for 'dbListFields' dbWriteTable2: no visible global function definition for 'dbGetQuery' dbWriteTable2: no visible global function definition for 'dbSendQuery' dbWriteTable2: no visible global function definition for 'dbColumnInfo' dbWriteTable2: no visible global function definition for 'dbClearResult' dbWriteTable2: no visible global function definition for 'dbWriteTable' groupBy: no visible global function definition for 'dbConnect' groupBy: no visible global function definition for 'dbDriver' groupBy: no visible global function definition for 'dbWriteTable' groupBy: no visible global function definition for 'dbGetQuery' heatmatrix: no visible global function definition for 'image' heatmatrix: no visible global function definition for 'text' heatmatrix: no visible global function definition for 'par' hyperplot: no visible global function definition for 'png' hyperplot: no visible global function definition for 'plot' hyperplot: no visible global function definition for 'par' hyperplot: no visible global function definition for 'dev.off' hyperplot: no visible global function definition for 'browseURL' labsegs: no visible global function definition for 'segments' leghead: no visible global function definition for 'head' leghead: no visible global function definition for 'rainbow' mvlabs: no visible global function definition for 'colors' mvlabs: no visible global function definition for 'identify' mvlabs: no visible global function definition for 'locator' mvlabs: no visible global function definition for 'text' parseArgString: no visible global function definition for 'as' pies: no visible global function definition for 'par' pies: no visible global function definition for 'plot' pies: no visible global function definition for 'rainbow' pies: no visible global function definition for 'plot.new' pies: no visible global function definition for 'plot.window' pies: no visible global function definition for 'polygon' pies: no visible global function definition for 'lines' pies: no visible global function definition for 'text' plotClock: no visible global function definition for 'polygon' plotClock: no visible global function definition for 'text' plotClock: no visible global function definition for 'segments' raAddArms: no visible global function definition for 'lines' raAddAxLabs: no visible global function definition for 'mtext' raAddSigLines: no visible global function definition for 'qnorm' raAddSigLines: no visible global function definition for 'lines' raPlot : u.epsilon: no visible global function definition for 'runif' raPlot: no visible global function definition for 'points' raPlot: no visible global function definition for 'segments' read.tab: no visible global function definition for 'read.delim' read.tab: no visible global function definition for 'count.fields' spie: no visible global function definition for 'rainbow' spie: no visible global function definition for 'grid.newpage' spie: no visible global function definition for 'pushViewport' spie: no visible global function definition for 'viewport' spie: no visible global function definition for 'grid.layout' spie: no visible global function definition for 'dataViewport' spie: no visible global function definition for 'grid.circle' spie: no visible global function definition for 'gpar' spie: no visible global function definition for 'grid.polygon' spie: no visible global function definition for 'grid.rect' spie: no visible global function definition for 'stringWidth' spie: no visible global function definition for 'stringHeight' spie: no visible global function definition for 'grid.text' spie: no visible global function definition for 'grid.lines' spie: no visible global function definition for 'unit' spie: no visible global function definition for 'upViewport' textplot: no visible global function definition for 'plot' textplot: no visible global function definition for 'text' usr2lims: no visible global function definition for 'par' violins: no visible global function definition for 'quantile' violins: no visible global function definition for 'median' violins: no visible global function definition for 'sd' violins: no visible global function definition for 'plot.new' violins: no visible global function definition for 'plot.window' violins: no visible global function definition for 'axis' violins: no visible global function definition for 'title' violins: no visible global function definition for 'box' violins: no visible global function definition for 'polygon' violins: no visible global function definition for 'rect' violins: no visible global function definition for 'lines' violins: no visible global function definition for 'points' violins: no visible global function definition for 'segments' write.delim: no visible global function definition for 'write.table' Undefined global functions or variables: as axis box boxplot.stats browseURL colors count.fields dataViewport dbClearResult dbColumnInfo dbConnect dbDriver dbGetQuery dbListFields dbSendQuery dbWriteTable dev.off gpar grid.circle grid.layout grid.lines grid.newpage grid.polygon grid.rect grid.text head identify image lines locator median mtext par pbinom plot plot.new plot.window png points polygon pushViewport qbinom qnorm quantile rainbow read.delim rect runif sd segments shapiro.test stringHeight stringWidth text title unit upViewport var viewport write.table Consider adding importFrom("grDevices", "boxplot.stats", "colors", "dev.off", "png", "rainbow") importFrom("graphics", "axis", "box", "identify", "image", "lines", "locator", "mtext", "par", "plot", "plot.new", "plot.window", "points", "polygon", "rect", "segments", "text", "title") importFrom("methods", "as") importFrom("stats", "median", "pbinom", "qbinom", "qnorm", "quantile", "runif", "sd", "shapiro.test", "var") importFrom("utils", "browseURL", "count.fields", "head", "read.delim", "write.table") to your NAMESPACE file (and ensure that your DESCRIPTION Imports field contains 'methods'). * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [3s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs