* using log directory 'd:/Rcompile/CRANpkg/local/3.3/censReg.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'censReg/DESCRIPTION' ... OK * this is package 'censReg' version '0.5-22' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'censReg' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [7s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [89s] OK Running 'censRegFail.R' [4s] Comparing 'censRegFail.Rout' to 'censRegFail.Rout.save' ... OK Running 'censRegPanelLargerTest.R' [7s] Comparing 'censRegPanelLargerTest.Rout' to 'censRegPanelLargerTest.Rout.save' ... OK Running 'censRegPanelTest.R' [56s] Comparing 'censRegPanelTest.Rout' to 'censRegPanelTest.Rout.save' ...679c679 < BFGSR maximization, 72 iterations --- > BFGSR maximization, 77 iterations 712c712 < BFGSR maximization, 72 iterations --- > BFGSR maximization, 77 iterations 747c747 < [1] 72 --- > [1] 77 756c756 < [3,] 1.75 0.33 1.72 1.84 1.79 --- > [3,] 1.75 0.33 1.72 1.84 1.80 900c900 < BFGSR maximization, 71 iterations --- > BFGSR maximization, 76 iterations 906c906 < (Intercept) 4.63 0.48 9.7 <2e-16 *** --- > (Intercept) 4.63 0.47 9.7 <2e-16 *** 908c908 < x2 2.25 0.67 3.3 8e-04 *** --- > x2 2.25 0.67 3.3 9e-04 *** 925c925 < (Intercept) 4.63 0.48 9.7 <2e-16 *** --- > (Intercept) 4.63 0.47 9.7 <2e-16 *** 927c927 < x2 2.25 0.67 3.3 8e-04 *** --- > x2 2.25 0.67 3.3 9e-04 *** 933c933 < BFGSR maximization, 71 iterations --- > BFGSR maximization, 76 iterations 945c945 < (Intercept) 0.23 -0.02 -0.26 -0.02 0.00 --- > (Intercept) 0.23 -0.02 -0.25 -0.02 0.00 947c947 < x2 -0.26 0.01 0.45 0.02 0.00 --- > x2 -0.25 0.01 0.45 0.02 0.00 952c952 < (Intercept) 0.23 -0.02 -0.26 -0.02 0.00 --- > (Intercept) 0.23 -0.02 -0.25 -0.02 0.00 954c954 < x2 -0.26 0.01 0.45 0.02 0.00 --- > x2 -0.25 0.01 0.45 0.02 0.00 975c975 < (Intercept) -13.3 -4.1 -7.3 -2.2 -1.3 --- > (Intercept) -13.3 -4.1 -7.3 -2.1 -1.3 978c978 < logSigmaMu -2.2 4.5 -0.6 -16.7 -3.7 --- > logSigmaMu -2.1 4.5 -0.6 -16.7 -3.7 994c994 < [1] 71 --- > [1] 76 1003c1003 < [3,] 1.75 0.33 1.72 1.84 1.79 --- > [3,] 1.75 0.33 1.73 1.84 1.80 1007,1009c1007,1009 < [7,] -0.08 -3.19 -0.24 -0.68 6.04 < [8,] -0.26 0.38 0.06 -0.54 -1.11 < [9,] 1.15 0.59 0.30 0.14 -1.61 --- > [7,] -0.08 -3.19 -0.24 -0.68 6.03 > [8,] -0.27 0.38 0.06 -0.54 -1.11 > [9,] 1.15 0.59 0.30 0.13 -1.62 1108c1108 < BFGSR maximization, 72 iterations --- > BFGSR maximization, 77 iterations 1142c1142 < BFGSR maximization, 72 iterations --- > BFGSR maximization, 77 iterations 1154c1154 < (Intercept) 0.23 -0.02 -0.26 0.02 0.00 --- > (Intercept) 0.23 -0.02 -0.25 0.02 0.00 1156c1156 < x2 -0.26 0.01 0.45 -0.02 0.00 --- > x2 -0.25 0.01 0.45 -0.02 0.00 1161c1161 < (Intercept) 0.23 -0.02 -0.26 0.02 0.00 --- > (Intercept) 0.23 -0.02 -0.25 0.02 0.00 1163c1163 < x2 -0.26 0.01 0.45 -0.02 0.00 --- > x2 -0.25 0.01 0.45 -0.02 0.00 1201c1201 < [1] 72 --- > [1] 77 1210c1210 < [3,] -1.75 -0.33 -1.72 1.84 1.79 --- > [3,] -1.75 -0.33 -1.72 1.84 1.80 1316c1316 < BFGSR maximization, 90 iterations --- > BFGSR maximization, 76 iterations 1322c1322 < (Intercept) -4.63 0.47 -9.8 <2e-16 *** --- > (Intercept) -4.63 0.47 -9.7 <2e-16 *** 1342c1342 < (Intercept) -4.63 0.47 -9.8 <2e-16 *** --- > (Intercept) -4.63 0.47 -9.7 <2e-16 *** 1350c1350 < BFGSR maximization, 90 iterations --- > BFGSR maximization, 76 iterations 1392c1392 < x2 -7.3 -2.0 -6.2 0.6 0.5 --- > x2 -7.3 -2.0 -6.2 0.6 0.4 1394c1394 < logSigmaNu 1.3 -4.8 0.5 -3.7 -61.1 --- > logSigmaNu 1.3 -4.8 0.4 -3.7 -61.1 1409c1409 < [1] 90 --- > [1] 76 1425c1425 < [10,] 0.43 0.41 0.15 -0.47 -1.94 --- > [10,] 0.43 0.40 0.15 -0.47 -1.94 1519c1519 < -0.232 1.893 1.967 0.001 0.053 --- > -0.234 1.893 1.969 0.002 0.053 1524c1524 < BFGSR maximization, 94 iterations --- > BFGSR maximization, 99 iterations 1530c1530 < (Intercept) -0.232 0.548 -0.4 0.67 --- > (Intercept) -0.234 0.548 -0.4 0.67 1532,1533c1532,1533 < x2 1.967 0.818 2.4 0.02 * < logSigmaMu 0.001 0.278 0.0 1.00 --- > x2 1.969 0.819 2.4 0.02 * > logSigmaMu 0.002 0.278 0.0 1.00 1550c1550 < (Intercept) -0.232 0.548 -0.4 0.67 --- > (Intercept) -0.234 0.548 -0.4 0.67 1552,1553c1552,1553 < x2 1.967 0.818 2.4 0.02 * < logSigmaMu 0.001 0.278 0.0 1.00 --- > x2 1.969 0.819 2.4 0.02 * > logSigmaMu 0.002 0.278 0.0 1.00 1558c1558 < BFGSR maximization, 94 iterations --- > BFGSR maximization, 99 iterations 1578c1578 < sigmaNu 1.1 0.2 6.1 8e-10 *** --- > sigmaNu 1.1 0.2 6.1 9e-10 *** 1582c1582 < BFGSR maximization, 94 iterations --- > BFGSR maximization, 99 iterations 1608c1608 < (Intercept) -0.23 0.55 -0.42 0.67 --- > (Intercept) -0.23 0.55 -0.43 0.67 1610,1611c1610,1611 < x2 1.97 0.82 2.40 0.02 < logSigmaMu 0.00 0.28 0.00 1.00 --- > x2 1.97 0.82 2.41 0.02 > logSigmaMu 0.00 0.28 0.01 1.00 1615c1615 < (Intercept) -0.23 0.55 -0.42 0.67 --- > (Intercept) -0.23 0.55 -0.43 0.67 1617c1617 < x2 1.97 0.82 2.40 0.02 --- > x2 1.97 0.82 2.41 0.02 1657c1657 < [1] 94 --- > [1] 99 1674c1674 < [11,] -0.04 1.09 -0.51 -0.87 2.00 --- > [11,] -0.04 1.10 -0.51 -0.87 2.00 1677c1677 < [14,] -1.64 -1.35 -0.84 2.12 2.77 --- > [14,] -1.64 -1.35 -0.84 2.12 2.76 1828c1828 < -0.222 1.640 2.107 -0.168 -0.001 --- > -0.222 1.640 2.108 -0.167 -0.001 1833c1833 < BFGSR maximization, 72 iterations --- > BFGSR maximization, 77 iterations 1839c1839 < (Intercept) -0.222 0.472 -0.5 0.639 --- > (Intercept) -0.222 0.472 -0.5 0.638 1841,1842c1841,1842 < x2 2.107 0.685 3.1 0.002 ** < logSigmaMu -0.168 0.272 -0.6 0.537 --- > x2 2.108 0.685 3.1 0.002 ** > logSigmaMu -0.167 0.271 -0.6 0.538 1858c1858 < (Intercept) -0.222 0.472 -0.5 0.639 --- > (Intercept) -0.222 0.472 -0.5 0.638 1860,1861c1860,1861 < x2 2.107 0.685 3.1 0.002 ** < logSigmaMu -0.168 0.272 -0.6 0.537 --- > x2 2.108 0.685 3.1 0.002 ** > logSigmaMu -0.167 0.271 -0.6 0.538 1866c1866 < BFGSR maximization, 72 iterations --- > BFGSR maximization, 77 iterations 1887c1887 < x1 -4.3 -25.8 -2.1 4.6 4.0 --- > x1 -4.3 -25.8 -2.1 4.7 4.1 1889,1890c1889,1890 < logSigmaMu -1.1 4.6 -0.1 -14.9 -3.8 < logSigmaNu -1.9 4.0 -1.1 -3.8 -58.8 --- > logSigmaMu -1.1 4.7 -0.1 -14.9 -3.8 > logSigmaNu -1.9 4.1 -1.1 -3.8 -58.8 1905c1905 < [1] 72 --- > [1] 77 1914c1914 < [3,] 1.79 0.49 1.77 1.73 1.90 --- > [3,] 1.78 0.48 1.77 1.73 1.90 1916c1916 < [5,] 0.08 1.04 0.70 -0.68 -0.44 --- > [5,] 0.08 1.04 0.70 -0.68 -0.45 1922c1922 < [11,] -0.08 1.38 -0.65 -0.82 2.49 --- > [11,] -0.08 1.38 -0.65 -0.82 2.50 Running 'censRegTest.R' [20s] Comparing 'censRegTest.Rout' to 'censRegTest.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [22s] OK * checking PDF version of manual ... OK * DONE Status: OK