* using log directory 'd:/Rcompile/CRANpkg/local/3.3/datafsm.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'datafsm/DESCRIPTION' ... OK * this is package 'datafsm' version '0.1.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'datafsm' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... ERROR Running examples in 'datafsm-Ex.R' failed The error most likely occurred in: > ### Name: evolve_model > ### Title: Use a Genetic Algorithm to Estimate a Finite-state Machine Model > ### Aliases: evolve_model > > ### ** Examples > > # Create data: > cdata <- data.frame(period = rep(1:10, 1000), + outcome = rep(1:2, 5000), + my.decision1 = sample(1:0, 10000, TRUE), + other.decision1 = sample(1:0, 10000, TRUE)) > (res <- evolve_model(cdata, cv=FALSE)) We set a seed for you to make this reproducible. It is 12. If you want the same results, next time you run this with the same settings, also set the seed argument of this function to 12. Error in fitness(Pop[i, ], ...) : unused argument (maxfitness = 1) Calls: evolve_model -> -> fitness Execution halted ** running examples for arch 'x64' ... ERROR Running examples in 'datafsm-Ex.R' failed The error most likely occurred in: > ### Name: evolve_model > ### Title: Use a Genetic Algorithm to Estimate a Finite-state Machine Model > ### Aliases: evolve_model > > ### ** Examples > > # Create data: > cdata <- data.frame(period = rep(1:10, 1000), + outcome = rep(1:2, 5000), + my.decision1 = sample(1:0, 10000, TRUE), + other.decision1 = sample(1:0, 10000, TRUE)) > (res <- evolve_model(cdata, cv=FALSE)) We set a seed for you to make this reproducible. It is 12. If you want the same results, next time you run this with the same settings, also set the seed argument of this function to 12. Error in fitness(Pop[i, ], ...) : unused argument (maxfitness = 1) Calls: evolve_model -> -> fitness Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... ERROR Running the tests in 'tests/testthat.R' failed. Last 13 lines of output: Looking up history[4], period 1: (0, 536870925, 2237600) Looking up history[1], period 1: (0, 536870925, 2237600) Looking up history[2], period 0: (1, 536870925, 2237600) Looking up history[3], period 1: (0, 536870925, 2237600) Looking up history[4], period 1: (0, 536870925, 2237600) Looking up history[1], period 1: (1, 536870925, 2237600) testthat results ================================================================ OK: 3 SKIPPED: 0 FAILED: 2 1. Error: evolve_model() returns correct type of object (@test_mainfunc.R#7) 2. Error: evolve_model() returns warnings and errors (@test_mainfunc.R#14) Error: testthat unit tests failed Execution halted ** running tests for arch 'x64' ... ERROR Running the tests in 'tests/testthat.R' failed. Last 13 lines of output: Looking up history[4], period 1: (0, 536870925, 0) Looking up history[1], period 1: (0, 536870925, 0) Looking up history[2], period 0: (1, 536870925, 0) Looking up history[3], period 1: (0, 536870925, 0) Looking up history[4], period 1: (0, 536870925, 0) Looking up history[1], period 1: (1, 536870925, 0) testthat results ================================================================ OK: 3 SKIPPED: 0 FAILED: 2 1. Error: evolve_model() returns correct type of object (@test_mainfunc.R#7) 2. Error: evolve_model() returns warnings and errors (@test_mainfunc.R#14) Error: testthat unit tests failed Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... WARNING Error in re-building vignettes: ... Quitting from lines 105-106 (datafsmVignette.Rmd) Error: processing vignette 'datafsmVignette.Rmd' failed with diagnostics: unused argument (maxfitness = 1) Execution halted * checking PDF version of manual ... OK * DONE Status: 4 ERRORs, 1 WARNING