* using log directory 'd:/Rcompile/CRANpkg/local/3.3/dbConnect.Rcheck'
* using R version 3.3.2 (2016-10-31)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'dbConnect/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'dbConnect' version '1.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'dbConnect' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
  'RMySQL' 'gWidgets'
  Please remove these calls from your code.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
DatabaseConnect : dlgConnect: warning in ggroup(horizontal = FALSE,
  cont = win): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in ggroup(vertical = TRUE,
  horizontal = FALSE, cont = g): partial argument match of 'cont' to
  'container'
DatabaseConnect : dlgConnect: warning in ggroup(horizontal = TRUE, cont
  = connectionGroup): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in glabel(text = "Server Host: ",
  cont = serverGroup): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gedit(text =
  "headnode.stat.iastate.edu", editable = T, cont = serverGroup, width
  = 16): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in glabel(text = "Port: ", cont =
  serverGroup): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gedit(text = "3306", editable
  = T, cont = serverGroup, width = 8): partial argument match of 'cont'
  to 'container'
DatabaseConnect : dlgConnect: warning in glabel(text = "Username: ",
  cont = userGroup): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gedit(text = "2009Expo",
  editable = T, width = 34, cont = userGroup): partial argument match
  of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in glabel(text = "Password: ",
  cont = pwdGroup): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gedit(text = "R R0cks",
  editable = T, width = 34, cont = pwdGroup): partial argument match of
  'cont' to 'container'
DatabaseConnect : dlgConnect: warning in glabel(text = "Database: ",
  cont = dbGroup): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gedit(text = "data_expo_2009",
  editable = T, width = 34, cont = dbGroup): partial argument match of
  'cont' to 'container'
DatabaseConnect : dlgConnect: warning in ggroup(horizontal = TRUE, cont
  = g): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gbutton("Connect", cont =
  buttonGroup, handler = function(h, ...) {: partial argument match of
  'cont' to 'container'
DatabaseConnect : dlgConnect: warning in library(RMySQL): partial
  argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in .dbhistory <<-
  paste(.dbhistory, "library(RMySQL)", sep = "\n"): partial argument
  match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in drv <- dbDriver("MySQL"):
  partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in .dbhistory <<-
  paste(.dbhistory, "drv <- dbDriver(\"MySQL\")", sep = "\n"): partial
  argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in con <<- dbConnect(drv, user =
  svalue(user), password = svalue(pwd), port =
  as.numeric(svalue(port)), dbname = svalue(dbname), host =
  svalue(server)): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in .dbhistory <<-
  paste(.dbhistory, "\ncon <- dbConnect(drv, user = \"", svalue(user),
  "\", password = \"", svalue(pwd), "\", port = ",
  as.numeric(svalue(port)), ", dbname = \"", svalue(dbname), "\", host
  = \"", svalue(server), "\")", sep = ""): partial argument match of
  'cont' to 'container'
DatabaseConnect : dlgConnect: warning in svalue(okButton) <-
  "Connected": partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in dispose(win): partial argument
  match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in databaseViewer(con): partial
  argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect: warning in }): partial argument match of
  'cont' to 'container'
DatabaseConnect : dlgConnect: warning in gbutton("Close", cont =
  buttonGroup, handler = function(h, ...) {: partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = F,
  cont = win): partial argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = F,
  cont = win): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = T,
  cont = gg): partial argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer : saveHist: warning in ggroup(hor = T,
  cont = gg): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in glabel("Save
  history to file?", cont = g1): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer : saveHist: warning in glabel("Save in
  directory:", cont = g2): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer : saveHist: warning in
  gedit(paste(getwd()), expand = T, cont = g2): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in glabel("Save
  as:", cont = g3): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in
  gedit("dbhistory.R", expand = T, cont = g3): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in gbutton("Save",
  handler = function(h, ...) {: partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer : saveHist: warning in cat(dbhist,
  file = paste(svalue(dirline), "/", svalue(saveline), sep = "")):
  partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in dispose(win):
  partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in }, cont = g4):
  partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : saveHist: warning in
  gbutton("Cancel", handler = function(h, ...) {: partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  mainWindow, expand = T): partial argument match of 'hor' to
  'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  mainWindow, expand = T): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer: warning in gnotebook(cont =
  mainGroup, expand = T): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$notebook, label = "Data Viewer", expand = T): partial
  argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$notebook, label = "Data Viewer", expand = T): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$notebook, label = "Variable Browser", expand = T): partial
  argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$notebook, label = "Variable Browser", expand = T): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$notebook, label = "Subsample", expand = T): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$notebook, label = "Subsample", expand = T): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$notebook, label = "Query", expand = T): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$notebook, label = "Query", expand = T): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gnotebook(cont =
  .db$main$nbList$line$group, expand = T): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$nbList$line$notebook, label = i, expand = T): partial
  argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$nbList$line$notebook, label = i, expand = T): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$line$nbList[[i]]$group, expand = F): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$line$nbList[[i]]$group, expand = F): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in glabel(tablename, cont =
  .db$main$nbList$line$nbList[[i]]$infogroup): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in glabel(tablerows, cont =
  .db$main$nbList$line$nbList[[i]]$infogroup): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gnotebook(cont =
  .db$main$nbList$variable$group, expand = T): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$nbList$variable$notebook, label = i, expand = T): partial
  argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, cont =
  .db$main$nbList$variable$notebook, label = i, expand = T): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$variable$nbList[[i]]$group, expand = F): partial
  argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$variable$nbList[[i]]$group, expand = F): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in glabel(tablename, cont =
  .db$main$nbList$variable$nbList[[i]]$infogroup): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in glabel(tablerows, cont =
  .db$main$nbList$variable$nbList[[i]]$infogroup): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gradio(.db$tables$usable,
  hor = F): partial argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in gframe("Tables", hor = F,
  expand = F, cont = .db$main$nbList$subsample$group): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in gframe("Tables", hor = F,
  expand = F, cont = .db$main$nbList$subsample$group): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
  F, cont = .db$main$nbList$subsample$group): partial argument match of
  'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
  F, cont = .db$main$nbList$subsample$group): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
  F, cont = .db$main$nbList$subsample$right$group): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = F, expand =
  F, cont = .db$main$nbList$subsample$right$group): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
  F, cont = .db$main$nbList$subsample$right$group): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
  F, cont = .db$main$nbList$subsample$right$group): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
  F, cont = .db$main$nbList$subsample$right$groupTop): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, expand =
  F, cont = .db$main$nbList$subsample$right$groupTop): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gbutton("Add Row", cont =
  .db$main$nbList$subsample$right$groupBottom): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gbutton("Remove Row", cont
  = .db$main$nbList$subsample$right$groupBottom): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gbutton("Reset to
  defaults", cont = .db$main$nbList$subsample$right$groupBottom):
  partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$subsample$right$groupBottom): partial argument match
  of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$subsample$right$groupBottom): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in glabel("Limit:", cont =
  .db$main$nbList$subsample$right$top$limitGroup): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gedit(.db$noLimit, cont =
  .db$main$nbList$subsample$right$top$limitGroup): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gbutton("Help", cont =
  .db$main$nbList$subsample$right$groupBottom): partial argument match
  of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gbutton("Execute Query",
  cont = .db$main$nbList$subsample$right$rows[[1]]$group): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in
  gcombobox(.db$fields[[.db$tables$usable[1]]], cont =
  .db$main$nbList$subsample$right$rows[[1]]$group): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in
  gcombobox(.db$compareOptions, cont =
  .db$main$nbList$subsample$right$rows[[1]]$group, width =
  .db$optionComboBoxWidth): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer: warning in gedit(.db$initialValue,
  cont = .db$main$nbList$subsample$right$rows[[1]]$group, expand = T):
  partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : addRowHandler: warning in ggroup(hor
  = T, expand = T, ): partial argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer : addRowHandler: warning in
  gradio(c("AND", "OR"), hor = T, cont =
  .db$main$nbList$subsample$right$rows[[i]]$group): partial argument
  match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer : addRowHandler: warning in
  gradio(c("AND", "OR"), hor = T, cont =
  .db$main$nbList$subsample$right$rows[[i]]$group): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer : addRowHandler: warning in
  gcombobox(.db$fields[[currentTable]], cont =
  .db$main$nbList$subsample$right$rows[[i]]$group): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer : addRowHandler: warning in
  gcombobox(.db$compareOptions, cont =
  .db$main$nbList$subsample$right$rows[[i]]$group, width =
  .db$optionComboBoxWidth): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer : addRowHandler: warning in
  gedit(.db$initialValue, cont =
  .db$main$nbList$subsample$right$rows[[i]]$group, expand = T): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(cont =
  window, hor = F): partial argument match of 'hor' to 'horizontal'
DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(cont =
  window, hor = F): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
  F, expand = T, cont = group): partial argument match of 'hor' to
  'horizontal'
DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
  F, expand = T, cont = group): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer : helpDialog: warning in
  gtext(strwrap(message, wrap), cont = top.group, expand = T, editable
  = F): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
  T, expand = F, cont = group): partial argument match of 'hor' to
  'horizontal'
DatabaseConnect : databaseViewer : helpDialog: warning in ggroup(hor =
  T, expand = F, cont = group): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer : helpDialog: warning in gbutton("ok",
  expand = T, handler = function(h, ...) {: partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer : helpDialog: warning in
  dispose(window): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer : helpDialog: warning in }, cont =
  bottom.group): partial argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$group): partial argument match of 'hor' to
  'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$group): partial argument match of 'cont' to
  'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$queryLine$group): partial argument match of
  'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$queryLine$group): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gbutton("Run following
  query:", cont = .db$main$nbList$query$queryLine$leftGroup, ): partial
  argument match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gedit(starttext, cont =
  .db$main$nbList$query$queryLine$group, expand = T): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$tabLine$group): partial argument match of 'hor'
  to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$tabLine$group): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer: warning in glabel("Tab Name: ", cont
  = .db$main$nbList$query$tabLine$leftGroup): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gedit("Tab", cont =
  .db$main$nbList$query$tabLine$group, expand = T): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$saveLine$group): partial argument match of
  'hor' to 'horizontal'
DatabaseConnect : databaseViewer: warning in ggroup(hor = T, cont =
  .db$main$nbList$query$saveLine$group): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gcheckbox("Save in R?  ",
  cont = .db$main$nbList$query$saveLine$leftGroup, ): partial argument
  match of 'cont' to 'container'
DatabaseConnect : databaseViewer: warning in gnotebook(cont =
  .db$main$nbList$query$group, expand = T): partial argument match of
  'cont' to 'container'
DatabaseConnect : databaseViewer : queryHandler: warning in
  gtable(as.data.frame(output), cont = .db$main$nbList$query$notebook,
  label = tabname): partial argument match of 'cont' to 'container'
DatabaseConnect : dlgConnect : <anonymous>: no visible global function
  definition for 'dbDriver'
DatabaseConnect : databaseViewer: no visible global function definition
  for 'dbGetQuery'
DatabaseConnect : databaseViewer : lineHandler: no visible global
  function definition for 'dbGetQuery'
DatabaseConnect : databaseViewer : variableHandler: no visible global
  function definition for 'dbGetQuery'
DatabaseConnect : databaseViewer : queryHandler: no visible global
  function definition for 'dbGetQuery'
Undefined global functions or variables:
  dbDriver dbGetQuery
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs