* using log directory 'd:/Rcompile/CRANpkg/local/3.3/detrendeR.Rcheck'
* using R version 3.3.2 (2016-10-31)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'detrendeR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'detrendeR' version '1.0.4'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'detrendeR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Package in Depends field not imported from: 'dplR'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  '.get' 'InteractiveDetrending' 'RemoveTrend'
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.NegExp: no visible global function definition for 'nls'
.NegExp: no visible global function definition for 'predict'
.NegExp: no visible global function definition for 'lm'
.NegExp: no visible global function definition for 'coef'
.SPLINE: no visible global function definition for 'ffcsaps'
.optionsDefault: no visible binding for global variable 'method1'
.optionsDefault: no visible binding for global variable 'n1'
.optionsDefault: no visible binding for global variable 'nPerc1'
.optionsDefault: no visible binding for global variable 'p1'
.optionsDefault: no visible binding for global variable 'method2'
.optionsDefault: no visible binding for global variable 'n2'
.optionsDefault: no visible binding for global variable 'nPerc2'
.optionsDefault: no visible binding for global variable 'p2'
ArFunction : ar.fun: no visible global function definition for
  'na.omit'
ArFunction : ar.fun: no visible global function definition for 'ar'
CRONO: no visible binding for global variable 'arMAX'
CRONO: no visible binding for global variable '.heigth'
CRONO: no visible binding for global variable 'makeAr'
CRONO: no visible binding for global variable 'biweightMean'
Chron: no visible binding for global variable 'tbrm'
DeleteSeriesShorterThan: no visible global function definition for
  'write.rwl'
DetrendeR : <anonymous>: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : <anonymous>: no visible global function definition for
  'write.table'
DetrendeR : <anonymous>: no visible binding for global variable
  'TempDataBase'
DetrendeR : <anonymous>: no visible binding for global variable 'fname'
DetrendeR : foo: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : DELETE_DATASET: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : SERIES_INFORMATION: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : TREE_IDS: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : TREE_IDS: no visible binding for global variable 'stc'
DetrendeR : MISSING_RINGS: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : RWL_INFO: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : SEG_PLOT: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : RWL_PLOT: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : AR.MODEL: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : makeCRONO: no visible binding for global variable
  'DataBaseChoice'
DetrendeR : EPS: no visible binding for global variable
  'DataBaseChoice'
Detrender.Options: no visible binding for global variable 'makeSegPlot'
Detrender.Options: no visible binding for global variable
  'remove.shorter.series'
Detrender.Options: no visible binding for global variable
  'delete.shorter.series'
Detrender.Options: no visible binding for global variable
  'makeFirstDetrending'
Detrender.Options: no visible binding for global variable
  'save.detrend1'
Detrender.Options: no visible binding for global variable 'method1'
Detrender.Options: no visible binding for global variable 'n1'
Detrender.Options: no visible binding for global variable 'nPerc1'
Detrender.Options: no visible binding for global variable 'p1'
Detrender.Options: no visible binding for global variable
  'makeSecondDetrending'
Detrender.Options: no visible binding for global variable
  'save.detrend2'
Detrender.Options: no visible binding for global variable 'method2'
Detrender.Options: no visible binding for global variable 'n2'
Detrender.Options: no visible binding for global variable 'nPerc2'
Detrender.Options: no visible binding for global variable 'p2'
Detrender.Options: no visible binding for global variable 'arMAX'
Detrender.Options: no visible binding for global variable 'makeAr'
Detrender.Options: no visible binding for global variable
  'run.win.analysis'
Detrender.Options: no visible binding for global variable
  'make.common.EPS'
Detrender.Options: no visible binding for global variable
  'make.select.period.EPS'
Detrender.Options: no visible binding for global variable
  'first.year.common'
Detrender.Options: no visible binding for global variable
  'last.year.common'
Detrender.Options: no visible binding for global variable 'winLength'
Detrender.Options: no visible binding for global variable 'stepWin'
EPS.common.interval: no visible global function definition for
  'na.omit'
EPS.value: no visible global function definition for 'cor'
InteractiveDetrending : draw: no visible global function definition for
  'matplot'
InteractiveDetrending : draw: no visible global function definition for
  'lines'
InteractiveDetrending : draw: no visible binding for global variable
  'currentBANDWIDTH'
InteractiveDetrending : draw: no visible binding for global variable
  'currentBANDWIDTH.P'
InteractiveDetrending : draw: no visible binding for global variable
  'currentP'
InteractiveDetrending : draw: no visible global function definition for
  'mtext'
InteractiveDetrending : re.draw: no visible global function definition
  for 'matplot'
InteractiveDetrending : re.draw: no visible global function definition
  for 'lines'
InteractiveDetrending : re.draw: no visible binding for global variable
  'currentBANDWIDTH'
InteractiveDetrending : re.draw: no visible binding for global variable
  'currentBANDWIDTH.P'
InteractiveDetrending : re.draw: no visible binding for global variable
  'currentP'
InteractiveDetrending : re.draw: no visible global function definition
  for 'mtext'
InteractiveDetrending: no visible global function definition for
  'dev.off'
InteractiveDetrending: no visible global function definition for
  'dev.cur'
NegExp: no visible global function definition for 'nls'
NegExp: no visible global function definition for 'predict'
NegExp: no visible global function definition for 'lm'
NegExp: no visible global function definition for 'coef'
PlotChron: no visible global function definition for 'par'
PlotChron: no visible global function definition for 'plot'
PlotChron: no visible global function definition for 'na.omit'
PlotChron: no visible global function definition for 'lines'
PlotChron: no visible global function definition for 'abline'
PrintPlotChrono: no visible global function definition for 'write.crn'
PrintPlotChrono: no visible global function definition for 'jpeg'
PrintPlotChrono: no visible global function definition for 'dev.off'
PrintPlotChrono: no visible global function definition for 'matplot'
PrintPlotChrono: no visible global function definition for 'lines'
RunWindow: no visible global function definition for 'na.omit'
RwlInfo : acf1: no visible global function definition for 'acf'
RwlInfo : skew: no visible global function definition for 'sd'
RwlInfo : info.fun: no visible global function definition for 'cor'
RwlInfo : info.fun: no visible global function definition for 'median'
RwlInfo : info.fun: no visible global function definition for 'sd'
RwlInfo : info.fun: no visible global function definition for 'sens1'
RwlInfo : info.fun: no visible global function definition for 'sens2'
RwlInfo : info.fun: no visible global function definition for
  'gini.coef'
SPLINE: no visible global function definition for 'ffcsaps'
ar.func: no visible global function definition for 'na.omit'
ar.func: no visible global function definition for 'ar'
arMODEL: no visible binding for global variable 'arMAX'
arMODEL: no visible binding for global variable '.heigth'
arMODEL: no visible binding for global variable 'makeAr'
arstan: no visible binding for global variable 'stc'
arstan: no visible binding for global variable 'makeSegPlot'
arstan: no visible global function definition for 'jpeg'
arstan: no visible global function definition for 'dev.off'
arstan: no visible binding for global variable 'remove.shorter.series'
arstan: no visible binding for global variable 'delete.shorter.series'
arstan: no visible binding for global variable 'makeFirstDetrending'
arstan : SaveDetrendJPG: no visible global function definition for
  'jpeg'
arstan : SaveDetrendJPG: no visible global function definition for
  'plot'
arstan : SaveDetrendJPG: no visible global function definition for
  'mtext'
arstan : SaveDetrendJPG: no visible global function definition for
  'lines'
arstan : SaveDetrendJPG: no visible global function definition for
  'dev.off'
arstan: no visible binding for global variable
  'first.detrending.method'
arstan: no visible binding for global variable 'method1'
arstan: no visible binding for global variable 'nPerc1'
arstan: no visible binding for global variable 'n1'
arstan: no visible binding for global variable 'p1'
arstan: no visible binding for global variable 'interactive.detrend'
arstan: no visible binding for '<<-' assignment to
  'first.detrending.method'
arstan: no visible binding for global variable 'save.detrend1'
arstan: no visible global function definition for 'write.rwl'
arstan: no visible binding for global variable 'makeSecondDetrending'
arstan: no visible binding for global variable 'method2'
arstan: no visible binding for global variable 'nPerc2'
arstan: no visible binding for global variable 'n2'
arstan: no visible binding for global variable 'p2'
arstan: no visible binding for global variable 'save.detrend2'
arstan: no visible binding for global variable 'run.win.analysis'
arstan: no visible binding for global variable 'winLength'
arstan: no visible binding for global variable 'stepWin'
arstan: no visible binding for global variable 'make.common.EPS'
arstan: no visible binding for global variable 'make.select.period.EPS'
arstan: no visible binding for global variable 'first.year.common'
arstan: no visible binding for global variable 'last.year.common'
arstan: no visible binding for global variable 'makeAr'
arstan: no visible binding for global variable 'arMAX'
commonInterval: no visible global function definition for 'na.omit'
detrenderGUI: no visible binding for global variable 'stc'
detrenderGUI: no visible binding for global variable
  'remove.shorter.series'
detrenderGUI: no visible binding for global variable
  'delete.shorter.series'
detrenderGUI: no visible binding for global variable 'makeSegPlot'
detrenderGUI: no visible binding for global variable
  'interactive.detrend'
detrenderGUI: no visible binding for global variable 'method1'
detrenderGUI: no visible binding for global variable 'method2'
detrenderGUI: no visible binding for global variable 'n1'
detrenderGUI: no visible binding for global variable 'nPerc1'
detrenderGUI: no visible binding for global variable 'p1'
detrenderGUI: no visible binding for global variable 'n2'
detrenderGUI: no visible binding for global variable 'nPerc2'
detrenderGUI: no visible binding for global variable 'p2'
detrenderGUI: no visible binding for global variable 'makeAr'
detrenderGUI: no visible binding for global variable 'arMAX'
detrenderGUI: no visible binding for global variable 'biweightMean'
detrenderGUI: no visible binding for global variable 'run.win.analysis'
detrenderGUI: no visible binding for global variable 'winLength'
detrenderGUI: no visible binding for global variable 'stepWin'
detrenderGUI: no visible binding for global variable 'make.common.EPS'
detrenderGUI: no visible binding for global variable
  'make.select.period.EPS'
detrenderGUI: no visible binding for global variable
  'first.year.common'
detrenderGUI: no visible binding for global variable 'last.year.common'
detrenderGUI : OnOk: no visible binding for global variable 'method1'
detrenderGUI : OnOk: no visible binding for global variable 'n1'
detrenderGUI : OnOk: no visible binding for global variable 'nPerc1'
detrenderGUI : OnOk: no visible binding for global variable 'p1'
detrenderGUI : OnOk: no visible binding for global variable 'method2'
detrenderGUI : OnOk: no visible binding for global variable 'n2'
detrenderGUI : OnOk: no visible binding for global variable 'nPerc2'
detrenderGUI : OnOk: no visible binding for global variable 'p2'
detrenderGUI : OnOk: no visible binding for global variable
  'make.select.period.EPS'
detrenderGUI : OnOk: no visible binding for global variable
  'first.year.common'
detrenderGUI : OnOk: no visible binding for global variable
  'last.year.common'
detrending: no visible binding for global variable '.heigth'
detrending: no visible binding for global variable 'method1'
detrending: no visible binding for global variable 'method2'
detrending: no visible binding for global variable 'n1'
detrending: no visible binding for global variable 'nPerc1'
detrending: no visible binding for global variable 'p1'
detrending: no visible binding for global variable 'n2'
detrending: no visible binding for global variable 'nPerc2'
detrending: no visible binding for global variable 'p2'
detrending : OnOk: no visible binding for '<<-' assignment to
  'makeFirstDetrending'
detrending : OnOk: no visible binding for '<<-' assignment to 'method1'
detrending : OnOk: no visible binding for '<<-' assignment to 'n1'
detrending : OnOk: no visible binding for '<<-' assignment to 'nPerc1'
detrending : OnOk: no visible binding for '<<-' assignment to 'p1'
detrending : OnOk: no visible binding for '<<-' assignment to
  'first.detrending.method'
detrending : OnOk: no visible binding for global variable 'method1'
detrending : OnOk: no visible binding for global variable 'n1'
detrending : OnOk: no visible binding for global variable 'nPerc1'
detrending : OnOk: no visible binding for global variable 'p1'
detrending : OnOk: no visible binding for '<<-' assignment to
  'makeSecondDetrending'
detrending : OnOk: no visible binding for '<<-' assignment to 'method2'
detrending : OnOk: no visible binding for '<<-' assignment to 'n2'
detrending : OnOk: no visible binding for '<<-' assignment to 'nPerc2'
detrending : OnOk: no visible binding for '<<-' assignment to 'p2'
detrending : OnOk: no visible binding for '<<-' assignment to
  'second.detrending.method'
detrending : OnOk: no visible binding for global variable 'method2'
detrending : OnOk: no visible binding for global variable 'n2'
detrending : OnOk: no visible binding for global variable 'nPerc2'
detrending : OnOk: no visible binding for global variable 'p2'
detrending : OnOk: no visible binding for '<<-' assignment to
  'interactive.detrend'
detrending: no visible binding for global variable
  'interactive.detrend'
interactiveDETRENDING: no visible binding for global variable
  'makeFirstDetrending'
interactiveDETRENDING: no visible binding for global variable
  'first.detrending.method'
interactiveDETRENDING: no visible binding for global variable
  'interactive.detrend'
interactiveDETRENDING: no visible binding for global variable
  'second.detrending.method'
interactiveEPS: no visible binding for global variable '.heigth'
interactiveEPS: no visible binding for global variable
  'run.win.analysis'
interactiveEPS: no visible binding for global variable 'winLength'
interactiveEPS: no visible binding for global variable 'stepWin'
interactiveEPS: no visible binding for global variable
  'make.common.EPS'
interactiveEPS: no visible binding for global variable
  'make.select.period.EPS'
interactiveEPS: no visible binding for global variable
  'first.year.common'
interactiveEPS: no visible binding for global variable
  'last.year.common'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'winLength'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'run.win.analysis'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'stepWin'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'make.common.EPS'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'make.select.period.EPS'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'first.year.common'
interactiveEPS : OnOk: no visible binding for '<<-' assignment to
  'last.year.common'
interactiveEPS : OnOk: no visible binding for global variable
  'run.win.analysis'
interactiveEPS : OnOk: no visible binding for global variable
  'winLength'
interactiveEPS : OnOk: no visible binding for global variable 'stepWin'
interactiveEPS : OnOk: no visible binding for global variable
  'first.year.common'
interactiveEPS : OnOk: no visible binding for global variable
  'last.year.common'
plotRwl: no visible global function definition for 'matplot'
plotRwl: no visible binding for global variable 'tbrm'
plotRwl: no visible global function definition for 'lines'
plotRwl: no visible global function definition for 'abline'
plotRwl: no visible binding for global variable 'sd'
plotRwl: no visible global function definition for 'write.table'
readCompact: no visible binding for global variable '.heigth'
readCrn: no visible global function definition for 'read.fwf'
readCrnFile: no visible binding for global variable '.heigth'
readRwl: no visible global function definition for 'read.fwf'
readRwlFile: no visible binding for global variable '.heigth'
readTable: no visible binding for global variable '.heigth'
saveDetrendJPG: no visible global function definition for 'jpeg'
saveDetrendJPG: no visible global function definition for 'plot'
saveDetrendJPG: no visible global function definition for 'mtext'
saveDetrendJPG: no visible global function definition for 'lines'
saveDetrendJPG: no visible global function definition for 'dev.off'
segPlot: no visible global function definition for 'par'
segPlot: no visible global function definition for 'plot'
segPlot: no visible binding for global variable 'lines'
segPlot: no visible global function definition for 'axis'
segPlot: no visible global function definition for 'box'
Undefined global functions or variables:
  .heigth DataBaseChoice TempDataBase abline acf ar arMAX axis
  biweightMean box coef cor currentBANDWIDTH currentBANDWIDTH.P
  currentP delete.shorter.series dev.cur dev.off ffcsaps
  first.detrending.method first.year.common fname gini.coef
  interactive.detrend jpeg last.year.common lines lm make.common.EPS
  make.select.period.EPS makeAr makeFirstDetrending
  makeSecondDetrending makeSegPlot matplot median method1 method2 mtext
  n1 n2 nPerc1 nPerc2 na.omit nls p1 p2 par plot predict read.fwf
  remove.shorter.series run.win.analysis save.detrend1 save.detrend2 sd
  second.detrending.method sens1 sens2 stc stepWin tbrm winLength
  write.crn write.rwl write.table
Consider adding
  importFrom("grDevices", "dev.cur", "dev.off", "jpeg")
  importFrom("graphics", "abline", "axis", "box", "lines", "matplot",
             "mtext", "par", "plot")
  importFrom("stats", "acf", "ar", "coef", "cor", "lm", "median",
             "na.omit", "nls", "predict", "sd")
  importFrom("utils", "read.fwf", "write.table")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [3s] OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs