* using log directory 'd:/Rcompile/CRANpkg/local/3.3/flexclust.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'flexclust/DESCRIPTION' ... OK * this is package 'flexclust' version '1.3-4' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'flexclust' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' call to 'clue' in package code. Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. There are ::: calls to the package's namespace in its code. A package almost never needs to use ::: for its own objects: 'getData' 'newKccaObject' * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE as.kcca.hclust: no visible global function definition for 'cutree' bootFlexclust: no visible global function definition for 'runif' boxOverlap: no visible binding for global variable 'quantile' cclust: no visible global function definition for 'complete.cases' centMedian: no visible binding for global variable 'median' centOptim: no visible global function definition for 'optim' centOptim01: no visible global function definition for 'optim' clusterEllipses: no visible global function definition for 'cov' clusterHulls: no visible global function definition for 'complete.cases' clusterHulls: no visible global function definition for 'median' clusterHulls: no visible global function definition for 'chull' distCor: no visible global function definition for 'cor' getDifferentCluster: no visible global function definition for 'solve_LSAP' kcca: no visible global function definition for 'complete.cases' kccaFamily : : no visible binding for global variable 'median' kruskalTest: no visible global function definition for 'kruskal.test' kruskalTest: no visible global function definition for 'p.adjust' medianInside: no visible binding for global variable 'median' medianInside: no visible binding for global variable 'quantile' panelShadow: no visible global function definition for 'hcl' panelShadow: no visible global function definition for 'approx' panelShadowBP: no visible global function definition for 'quantile' panelShadowViolin: no visible global function definition for 'density' perturbClusters: no visible global function definition for 'runif' priceFeature : circle: no visible global function definition for 'runif' priceFeature : square: no visible global function definition for 'runif' propBarchart: no visible global function definition for 'aggregate' propBarchart: no visible global function definition for 'p.adjust' randomTourMatrix: no visible global function definition for 'rnorm' randomTourRennes: no visible global function definition for 'rnorm' shadowStars: no visible global function definition for 'dist' stepFlexclust : bestKcca: no visible global function definition for 'runif' stripes: no visible global function definition for 'grey' placeLabels,projAxes: no visible global function definition for 'tail' Undefined global functions or variables: aggregate approx chull complete.cases cor cov cutree density dist grey hcl kruskal.test median optim p.adjust quantile rnorm runif solve_LSAP tail Consider adding importFrom("grDevices", "chull", "grey", "hcl") importFrom("stats", "aggregate", "approx", "complete.cases", "cor", "cov", "cutree", "density", "dist", "kruskal.test", "median", "optim", "p.adjust", "quantile", "rnorm", "runif") importFrom("utils", "tail") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [10s] OK ** running examples for arch 'x64' ... [11s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [11s] OK Running 'boot.R' [2s] Running 'disttests.R' [1s] Running 'grouping.R' [3s] Running 'plots.R' [2s] Running 'weights.R' [2s] ** running tests for arch 'x64' ... [13s] OK Running 'boot.R' [3s] Running 'disttests.R' [2s] Running 'grouping.R' [3s] Running 'plots.R' [3s] Running 'weights.R' [2s] * checking PDF version of manual ... OK * DONE Status: 2 NOTEs