* using log directory 'd:/Rcompile/CRANpkg/local/3.3/glmpathcr.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'glmpathcr/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'glmpathcr' version '1.0.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'glmpathcr' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Packages in Depends field not imported from: 'glmpath' 'mvtnorm' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE coef.glmpath.cr: no visible global function definition for 'approx' fitted.glmpath.cr: no visible global function definition for 'coef' glmpath.cr: no visible global function definition for 'glmpath' glmpath.cr: no visible binding for global variable 'binomial' nonzero.coef: no visible global function definition for 'coef' plot.glmpath.cr: no visible global function definition for 'par' plot.glmpath.cr: no visible global function definition for 'plot' plot.glmpath.cr: no visible global function definition for 'title' plot.glmpath.cr: no visible global function definition for 'matplot' plot.glmpath.cr: no visible global function definition for 'abline' plot.glmpath.cr: no visible global function definition for 'axis' plot.glmpath.cr: no visible global function definition for 'segments' predict.glmpath.cr: no visible global function definition for 'coef' summary.glmpath.cr: no visible global function definition for 'coef' Undefined global functions or variables: abline approx axis binomial coef glmpath matplot par plot segments title Consider adding importFrom("graphics", "abline", "axis", "matplot", "par", "plot", "segments", "title") importFrom("stats", "approx", "binomial", "coef") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [39s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [24s] OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs