* using log directory 'd:/Rcompile/CRANpkg/local/3.3/gstat.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'gstat/DESCRIPTION' ... OK * this is package 'gstat' version '1.1-3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'gstat' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... [16s] OK ** running examples for arch 'x64' ... [15s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [27s] OK Running 'allier.R' [1s] Comparing 'allier.Rout' to 'allier.Rout.save' ...152c152 < c(-0.000106836, 8.94523e-005) # row 2 --- > c(-0.000106836, 8.94523e-05) # row 2 316c316 < c(-0.000106836, 8.94523e-005) # row 2 --- > c(-0.000106836, 8.94523e-05) # row 2 Running 'blockkr.R' [1s] Comparing 'blockkr.Rout' to 'blockkr.Rout.save' ... OK Running 'covtable.R' [1s] Comparing 'covtable.Rout' to 'covtable.Rout.save' ... OK Running 'cv.R' [1s] Comparing 'cv.Rout' to 'cv.Rout.save' ...13,15d12 < Warning message: < In fit.variogram(x, m, fit.ranges = fit.ranges, ...) : < No convergence after 200 iterations: try different initial values? Running 'cv3d.R' [2s] Comparing 'cv3d.Rout' to 'cv3d.Rout.save' ... OK Running 'fit.R' [1s] Comparing 'fit.Rout' to 'fit.Rout.save' ... OK Running 'krige0.R' [4s] Comparing 'krige0.Rout' to 'krige0.Rout.save' ... OK Running 'line.R' [1s] Comparing 'line.Rout' to 'line.Rout.save' ...28c28 < a 180333 332167 6.1618 0.0080251 --- > a 180333 332167 6.1618 0.008025 66c66 < 1 (0, 0) 6.1618 0.0080251 --- > 1 (0, 0) 6.1618 0.008025 142,143c142,143 < a 180333 332167 6.1618 0.0080251 < b 181000 333000 5.7060 0.0110429 --- > a 180333 332167 6.1618 0.008025 > b 181000 333000 5.7060 0.011043 Running 'merge.R' [1s] Comparing 'merge.Rout' to 'merge.Rout.save' ...190c190 < c(1.88217e-016, 0.5, 4) --- > c(-4.44089e-16, 0.5, 4) 270,273c270,273 < c( 0.5, 4.16334e-017), # row 1 < c( 0.5, -5.55112e-017), # row 2 < c(1.38778e-017, 0.5), # row 3 < c(1.38778e-017, 0.5) # row 4 --- > c( 0.5, 0), # row 1 > c( 0.5, -1.38778e-17), # row 2 > c(2.77556e-17, 0.5), # row 3 > c( 0, 0.5) # row 4 Running 'na.action.R' [1s] Comparing 'na.action.Rout' to 'na.action.Rout.save' ... OK Running 'rings.R' [1s] Comparing 'rings.Rout' to 'rings.Rout.save' ... OK Running 'sim.R' [1s] Comparing 'sim.Rout' to 'sim.Rout.save' ...17,19c17,19 < 2 180310 332189 619.6634 802.32709 678.695 774.714 587.487 767.488 672.648 < 3 180205 331707 253.9294 3.85553 421.666 373.561 130.796 150.749 282.151 < 4 178673 330066 844.6284 1226.33655 561.425 337.763 579.610 620.360 791.288 --- > 2 180310 332189 619.6634 802.32715 678.695 774.714 587.487 767.488 672.648 > 3 180205 331707 253.9294 3.85552 421.666 373.561 130.796 150.749 282.151 > 4 178673 330066 844.6284 1226.33667 561.425 337.763 579.610 620.360 791.288 Running 'unproj.R' [2s] Comparing 'unproj.Rout' to 'unproj.Rout.save' ...5c5 < rgdal: version: 1.2-4, (SVN revision 643) --- > rgdal: version: 1.1-3, (SVN revision 594) 8c8 < Path to GDAL shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/gdal --- > Path to GDAL shared files: /usr/local/share/gdal 10,11c10,11 < Path to PROJ.4 shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/proj < Linking to sp version: 1.2-3 --- > Path to PROJ.4 shared files: (autodetected) > Linking to sp version: 1.2-2 81,85d80 < Spam version 1.4-0 (2016-08-29) is loaded. < Type 'help( Spam)' or 'demo( spam)' for a short introduction < and overview of this package. < Help for individual functions is also obtained by adding the < suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 87c82,84 < Attaching package: 'spam' --- > # ATTENTION: maps v3.0 has an updated 'world' map. # > # Many country borders and names have changed since 1990. # > # Type '?world' or 'news(package="maps")'. See README_v3. # 89d85 < The following objects are masked from 'package:base': 91c87,92 < backsolve, forwardsolve --- > > Attaching package: 'fields' > > The following object is masked from 'package:maps': > > ozone Running 'variogram.R' [1s] Comparing 'variogram.Rout' to 'variogram.Rout.save' ... OK Running 'vdist.R' [1s] Comparing 'vdist.Rout' to 'vdist.Rout.save' ...23c23 < 1500 (180260, 331300) 5.641176 1.100095 --- > 1500 (180260, 331300) 5.50671 1.100095 Running 'windst.R' [5s] Comparing 'windst.Rout' to 'windst.Rout.save' ...75c75 < rgdal: version: 1.2-4, (SVN revision 643) --- > rgdal: version: 1.1-3, (SVN revision 594) 78c78 < Path to GDAL shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/gdal --- > Path to GDAL shared files: /usr/local/share/gdal 80,81c80,87 < Path to PROJ.4 shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/proj < Linking to sp version: 1.2-3 --- > Path to PROJ.4 shared files: (autodetected) > Linking to sp version: 1.2-2 > > # ATTENTION: maps v3.0 has an updated 'world' map. # > # Many country borders and names have changed since 1990. # > # Type '?world' or 'news(package="maps")'. See README_v3. # > > ** running tests for arch 'x64' ... [31s] OK Running 'allier.R' [1s] Comparing 'allier.Rout' to 'allier.Rout.save' ...152c152 < c(-0.000106836, 8.94523e-005) # row 2 --- > c(-0.000106836, 8.94523e-05) # row 2 316c316 < c(-0.000106836, 8.94523e-005) # row 2 --- > c(-0.000106836, 8.94523e-05) # row 2 Running 'blockkr.R' [2s] Comparing 'blockkr.Rout' to 'blockkr.Rout.save' ... OK Running 'covtable.R' [2s] Comparing 'covtable.Rout' to 'covtable.Rout.save' ... OK Running 'cv.R' [1s] Comparing 'cv.Rout' to 'cv.Rout.save' ... OK Running 'cv3d.R' [2s] Comparing 'cv3d.Rout' to 'cv3d.Rout.save' ... OK Running 'fit.R' [1s] Comparing 'fit.Rout' to 'fit.Rout.save' ... OK Running 'krige0.R' [4s] Comparing 'krige0.Rout' to 'krige0.Rout.save' ... OK Running 'line.R' [2s] Comparing 'line.Rout' to 'line.Rout.save' ... OK Running 'merge.R' [1s] Comparing 'merge.Rout' to 'merge.Rout.save' ...190c190 < c( 0, 0.5, 4) --- > c(-4.44089e-16, 0.5, 4) 270,273c270,273 < c( 0.5, 1.38778e-017), # row 1 < c( 0.5, -1.38778e-017), # row 2 < c(2.77556e-017, 0.5), # row 3 < c(-4.16334e-017, 0.5) # row 4 --- > c( 0.5, 0), # row 1 > c( 0.5, -1.38778e-17), # row 2 > c(2.77556e-17, 0.5), # row 3 > c( 0, 0.5) # row 4 Running 'na.action.R' [1s] Comparing 'na.action.Rout' to 'na.action.Rout.save' ... OK Running 'rings.R' [1s] Comparing 'rings.Rout' to 'rings.Rout.save' ... OK Running 'sim.R' [2s] Comparing 'sim.Rout' to 'sim.Rout.save' ... OK Running 'unproj.R' [3s] Comparing 'unproj.Rout' to 'unproj.Rout.save' ...5c5 < rgdal: version: 1.2-4, (SVN revision 643) --- > rgdal: version: 1.1-3, (SVN revision 594) 8c8 < Path to GDAL shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/gdal --- > Path to GDAL shared files: /usr/local/share/gdal 10,11c10,11 < Path to PROJ.4 shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/proj < Linking to sp version: 1.2-3 --- > Path to PROJ.4 shared files: (autodetected) > Linking to sp version: 1.2-2 81,85d80 < Spam version 1.4-0 (2016-08-29) is loaded. < Type 'help( Spam)' or 'demo( spam)' for a short introduction < and overview of this package. < Help for individual functions is also obtained by adding the < suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 87c82,84 < Attaching package: 'spam' --- > # ATTENTION: maps v3.0 has an updated 'world' map. # > # Many country borders and names have changed since 1990. # > # Type '?world' or 'news(package="maps")'. See README_v3. # 89d85 < The following objects are masked from 'package:base': 91c87,92 < backsolve, forwardsolve --- > > Attaching package: 'fields' > > The following object is masked from 'package:maps': > > ozone Running 'variogram.R' [1s] Comparing 'variogram.Rout' to 'variogram.Rout.save' ... OK Running 'vdist.R' [1s] Comparing 'vdist.Rout' to 'vdist.Rout.save' ...23c23 < 1500 (180260, 331300) 5.641176 1.100095 --- > 1500 (180260, 331300) 5.50671 1.100095 Running 'windst.R' [5s] Comparing 'windst.Rout' to 'windst.Rout.save' ...75c75 < rgdal: version: 1.2-4, (SVN revision 643) --- > rgdal: version: 1.1-3, (SVN revision 594) 78c78 < Path to GDAL shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/gdal --- > Path to GDAL shared files: /usr/local/share/gdal 80,81c80,87 < Path to PROJ.4 shared files: D:/temp/RtmpYJu3Ty/RLIBS_47d4151b1818/rgdal/proj < Linking to sp version: 1.2-3 --- > Path to PROJ.4 shared files: (autodetected) > Linking to sp version: 1.2-2 > > # ATTENTION: maps v3.0 has an updated 'world' map. # > # Many country borders and names have changed since 1990. # > # Type '?world' or 'news(package="maps")'. See README_v3. # > > * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... [10s] OK * checking re-building of vignette outputs ... [63s] OK * checking PDF version of manual ... OK * DONE Status: OK