* using log directory 'd:/Rcompile/CRANpkg/local/3.3/liso.Rcheck'
* using R version 3.3.2 (2016-10-31)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'liso/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'liso' version '0.2'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .DESCRIPTION.swo
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
* checking for portable file names ... OK
* checking whether package 'liso' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  'Iso' 'MASS'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
ave.sorted: warning in matrix(y[lens == i], nr = i): partial argument
  match of 'nr' to 'nrow'
ave.sorted: warning in matrix(weights[lens == i], nr = i): partial
  argument match of 'nr' to 'nrow'
liso.adaptive: warning in multistep(coefc = rep(0, (nrow(x) - 1) *
  ncol(x)), x = x, intercept = sum(weights * y)/sum(weights), residual
  = y - sum(weights * y)/sum(weights), sorter = getSort(x)): partial
  argument match of 'coefc' to 'coefchain'
liso.backfit: warning in multistep(coefc = rep(0, (nrow(x) - 1) *
  ncol(x)), x = x, intercept = sum(weights * y)/sum(weights), residual
  = y - sum(weights * y)/sum(weights), sorter = getSort(x)): partial
  argument match of 'coefc' to 'coefchain'
&.multistep : addup: no visible global function definition for 'approx'
cv.liso: no visible global function definition for 'tail'
cv.liso: no visible binding for global variable 'var'
error.bars: no visible global function definition for 'segments'
liso.maxlamb: no visible global function definition for 'pava'
objsort : <anonymous>: no visible global function definition for
  'object.size'
pavareg: no visible global function definition for 'pava'
pavaregorig: no visible global function definition for 'pava'
plot.multistep: no visible global function definition for 'par'
plot.multistep: no visible global function definition for 'tail'
plot.multistep: no visible global function definition for 'plot'
plot.multistep: no visible global function definition for 'lines'
plot.multistep: no visible global function definition for 'title'
plot.multistep: no visible global function definition for 'points'
plotCV: no visible global function definition for 'plot'
repeatplot: no visible global function definition for 'plot'
repeatplot: no visible global function definition for 'lines'
repeatplot: no visible global function definition for 'points'
Undefined global functions or variables:
  approx lines object.size par pava plot points segments tail title var
Consider adding
  importFrom("graphics", "lines", "par", "plot", "points", "segments",
             "title")
  importFrom("stats", "approx", "var")
  importFrom("utils", "object.size", "tail")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'seq.log':
  'seq.log'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [147s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [23s] OK
  Running 'Liso.R' [23s]
* checking PDF version of manual ... OK
* DONE
Status: 5 NOTEs