* using log directory 'd:/Rcompile/CRANpkg/local/3.3/mlt.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'mlt/DESCRIPTION' ... OK * this is package 'mlt' version '0.1-1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'mlt' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [3s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [35s] OK Running '2sample.R' [3s] Comparing '2sample.Rout' to '2sample.Rout.save' ... OK Running 'Cox-Ex.R' [6s] Comparing 'Cox-Ex.Rout' to 'Cox-Ex.Rout.save' ...117c117 < -1.9216649 1.1005607 1.1005606 1.1005607 --- > -1.9230568 1.0990253 1.0990253 1.0990253 119c119 < 1.1005606 2.5827711 0.2129803 1.3660612 --- > 1.0990253 2.5868499 0.2141717 1.3682212 121c121 < 1.3660613 1.3660612 1.3660612 -0.1161492 --- > 1.3682213 1.3682213 1.3682213 -0.1196027 123c123 < 0.5158965 1.7816813 1.7816813 1.7816813 --- > 0.5177901 1.7839260 1.7839260 1.7839261 125c125 < 1.7816814 0.2994713 --- > 1.7839261 0.2963924 Running 'bugfixes.R' [5s] Comparing 'bugfixes.Rout' to 'bugfixes.Rout.save' ...41,50c41,50 < -2.43 -2.4280471 < -1.92 -1.7823038 < -1.4 -1.1665953 < -0.89 -0.6071381 < -0.375 -0.1118026 < 0.139 0.3298869 < 0.654 0.7467519 < 1.17 1.1859600 < 1.68 1.7130248 < 2.2 2.4118057 --- > -2.43 -2.4280629 > -1.92 -1.7823470 > -1.4 -1.1666146 > -0.89 -0.6071138 > -0.375 -0.1117461 > 0.139 0.3299331 > 0.654 0.7467151 > 1.17 1.1857376 > 1.68 1.7124847 > 2.2 2.4107869 Running 'dpq-Ex.R' [3s] Comparing 'dpq-Ex.Rout' to 'dpq-Ex.Rout.save' ... OK Running 'glm-Ex.R' [3s] Comparing 'glm-Ex.Rout' to 'glm-Ex.Rout.save' ...72c72 < 2.638288 42.637825 2.823595 --- > 0.3463234 42.6428122 3.3943753 74c74 < 2.465220 8.041685 6.680889 --- > 2.4651686 9.4840984 6.6812881 76c76 < -13.337833 -9.429388 -9.271013 --- > -14.2280962 -9.4300870 -10.3368149 78c78 < -18.286144 --- > -18.2875441 87c87 < [1] 0.001179841 --- > [1] 0.001198322 Running 'lm-Ex.R' [5s] Comparing 'lm-Ex.Rout' to 'lm-Ex.Rout.save' ... OK Running 'polr-Ex.R' [3s] Comparing 'polr-Ex.Rout' to 'polr-Ex.Rout.save' ... OK Running 'predict-Ex.R' [4s] Comparing 'predict-Ex.Rout' to 'predict-Ex.Rout.save' ... OK Running 'surv-Ex.R' [2s] Comparing 'surv-Ex.Rout' to 'surv-Ex.Rout.save' ... OK * checking PDF version of manual ... OK * DONE Status: OK