* using log directory 'd:/Rcompile/CRANpkg/local/3.3/pathmox.Rcheck'
* using R version 3.3.2 (2016-10-31)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'pathmox/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'pathmox' version '0.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'pathmox' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  'plspm' 'tester'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.path.scheme: no visible global function definition for 'lm'
.path.scheme: no visible global function definition for 'cor'
.pls.basic: no visible binding for global variable 'sd'
.pls.basic: no visible global function definition for 'cor'
.pls.loads: no visible global function definition for 'cor'
.pls.paths: no visible global function definition for 'lm'
.pls.weights: no visible global function definition for 'sd'
.pls.weights: no visible global function definition for 'cor'
.plsr1: no visible global function definition for 'sd'
.plsr1: no visible binding for global variable 'sd'
.plsr1: no visible global function definition for 'cor'
.sanchez.aluja: no visible global function definition for 'lm'
.sanchez.aluja: no visible global function definition for 'pf'
.sanchez.aluja: no visible global function definition for 'sd'
check_pathmox_args: no visible global function definition for
  'is_not_tabular'
fix.pathmox: no visible global function definition for 'get_manifests'
fix.pathmox: no visible global function definition for 'par'
fix.pathmox: no visible global function definition for 'openplotmat'
fix.pathmox: no visible global function definition for 'text'
fix.pathmox: no visible global function definition for 'coordinates'
fix.pathmox: no visible global function definition for 'straightarrow'
fix.pathmox: no visible global function definition for 'textellipse'
fix.pathmox: no visible global function definition for 'textrect'
fix.techmox: no visible global function definition for 'par'
fix.techmox: no visible global function definition for 'openplotmat'
fix.techmox: no visible global function definition for 'text'
fix.techmox: no visible global function definition for 'coordinates'
fix.techmox: no visible global function definition for 'straightarrow'
fix.techmox: no visible global function definition for 'textellipse'
fix.techmox: no visible global function definition for 'textrect'
get_pls_basic: no visible binding for global variable 'sd'
get_pls_basic: no visible global function definition for 'get_weights'
get_pls_basic: no visible global function definition for
  'test_null_weights'
get_pls_basic: no visible global function definition for 'get_scores'
get_pls_basic: no visible global function definition for 'cor'
get_pls_basic: no visible global function definition for 'get_paths'
pathmox: no visible global function definition for 'get_manifests'
plot.bootnodes: no visible global function definition for 'plot'
plot.bootnodes: no visible global function definition for 'abline'
plot.bootnodes: no visible global function definition for 'mtext'
plot.bootnodes: no visible global function definition for 'points'
plot.bootnodes: no visible global function definition for 'arrows'
plot.bootnodes: no visible global function definition for 'legend'
plot.treemox: no visible global function definition for 'par'
plot.treemox: no visible global function definition for 'openplotmat'
plot.treemox: no visible global function definition for 'coordinates'
plot.treemox: no visible global function definition for 'straightarrow'
plot.treemox: no visible global function definition for 'textellipse'
plot.treemox: no visible global function definition for 'textrect'
plot.treemox: no visible global function definition for 'text'
plot.treemox.pls: no visible global function definition for 'rainbow'
plot.treemox.pls: no visible global function definition for 'dev.new'
plot.treemox.pls: no visible global function definition for 'par'
plot.treemox.pls: no visible global function definition for 'barplot'
plot.treemox.pls: no visible global function definition for 'abline'
plot.treemox.pls: no visible global function definition for 'box'
plspmox: no visible global function definition for 'is_not_tabular'
plspmox: no visible global function definition for 'get_manifests'
plspmox: no visible global function definition for 'plspm'
techmox: no visible global function definition for 'get_manifests'
test_sanchez_aluja: no visible global function definition for 'lm'
test_sanchez_aluja: no visible global function definition for 'pf'
test_sanchez_aluja: no visible global function definition for 'sd'
treemox.boot: no visible global function definition for 'get_manifests'
treemox.boot: no visible binding for global variable 'sd'
treemox.boot: no visible global function definition for 'get_weights'
treemox.boot: no visible global function definition for 'get_paths'
treemox.boot : <anonymous>: no visible global function definition for
  'quantile'
treemox.pls: no visible global function definition for 'is_not_tabular'
treemox.pls: no visible global function definition for 'get_manifests'
Undefined global functions or variables:
  abline arrows barplot box coordinates cor dev.new get_manifests
  get_paths get_scores get_weights is_not_tabular legend lm mtext
  openplotmat par pf plot plspm points quantile rainbow sd
  straightarrow test_null_weights text textellipse textrect
Consider adding
  importFrom("grDevices", "dev.new", "rainbow")
  importFrom("graphics", "abline", "arrows", "barplot", "box", "legend",
             "mtext", "par", "plot", "points", "text")
  importFrom("stats", "cor", "lm", "pf", "quantile", "sd")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [0s] OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs