* using log directory 'd:/Rcompile/CRANpkg/local/3.3/qtlDesign.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'qtlDesign/DESCRIPTION' ... OK * this is package 'qtlDesign' version '0.941' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'qtlDesign' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE ci.length: no visible global function definition for 'qexp' detectable.bc: no visible global function definition for 'uniroot' detectable.f2: no visible global function definition for 'uniroot' detectable.ri: no visible global function definition for 'uniroot' nu: no visible global function definition for 'pnorm' nullinfo: no visible global function definition for 'qnorm' nullinfo: no visible global function definition for 'dnorm' optselection.bc: no visible global function definition for 'optimize' optselection.f2: no visible global function definition for 'optimize' optspacing.bc: no visible global function definition for 'optim' optspacing.bc: no visible global function definition for 'optimize' optspacing.f2: no visible global function definition for 'optim' optspacing.f2: no visible global function definition for 'optimize' powercalc.bc: no visible global function definition for 'pchisq' powercalc.f2: no visible global function definition for 'pchisq' samplesize.bc: no visible global function definition for 'uniroot' samplesize.f2: no visible global function definition for 'uniroot' samplesize.ri: no visible global function definition for 'uniroot' tailprob: no visible global function definition for 'pchisq' thresh: no visible global function definition for 'uniroot' Undefined global functions or variables: dnorm optim optimize pchisq pnorm qexp qnorm uniroot Consider adding importFrom("stats", "dnorm", "optim", "optimize", "pchisq", "pnorm", "qexp", "qnorm", "uniroot") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [0s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs