* using log directory 'd:/Rcompile/CRANpkg/local/3.3/rclinicaltrials.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'rclinicaltrials/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'rclinicaltrials' version '1.4.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'rclinicaltrials' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE clinicaltrials_download: no visible global function definition for 'unzip' Undefined global functions or variables: unzip Consider adding importFrom("utils", "unzip") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [0s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Last 13 lines of output: target <- lank$category_list fillout <- lank[names(lank) != "category_list"] cbind(fillout, target) }) 8: lapply(kids, FUN, ...) 9: FUN(X[[i]], ...) testthat results ================================================================ OK: 18 SKIPPED: 0 FAILED: 1 1. Error: download function returns correct format (@test-download.R#28) Error: testthat unit tests failed Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... WARNING Error in re-building vignettes: ... Quitting from lines 84-106 (basics.Rmd) Error: processing vignette 'basics.Rmd' failed with diagnostics: $ operator is invalid for atomic vectors Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR, 1 WARNING, 1 NOTE