* using log directory 'd:/Rcompile/CRANpkg/local/3.3/seqDesign.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'seqDesign/DESCRIPTION' ... OK * this is package 'seqDesign' version '1.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'seqDesign' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE GammaDist: no visible binding for global variable 'rgamma' VEpowerPP: no visible global function definition for 'qnorm' applyStopRules: no visible global function definition for 'qnorm' finalLogRankTest: no visible global function definition for 'qnorm' finalLogRankTest: no visible global function definition for 'pchisq' generateDropout: no visible global function definition for 'rexp' generateEnrollment: no visible global function definition for 'rpois' generateEnrollment: no visible global function definition for 'runif' generateInfection: no visible global function definition for 'rexp' generateInfection : : no visible global function definition for 'rexp' getAlphaPerTest: no visible global function definition for 'uniroot' getHarmBound: no visible global function definition for 'dbinom' getHarmBound: no visible global function definition for 'write.csv' getTreatmentAssignment : : no visible global function definition for 'runif' getTreatmentAssignment: no visible global function definition for 'runif' simTrial: no visible global function definition for 'runif' sumTrialOneTrtArm: no visible global function definition for 'quantile' testVE: no visible global function definition for 'qnorm' Undefined global functions or variables: dbinom pchisq qnorm quantile rexp rgamma rpois runif uniroot write.csv Consider adding importFrom("stats", "dbinom", "pchisq", "qnorm", "quantile", "rexp", "rgamma", "rpois", "runif", "uniroot") importFrom("utils", "write.csv") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [17s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [3s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE