* using log directory 'd:/Rcompile/CRANpkg/local/3.3/widenet.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'widenet/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'widenet' version '0.1-2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'widenet' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' calls in package code: 'genefilter' 'parallel' Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .onAttach: no visible global function definition for 'packageDescription' .relax.cvcompute: no visible binding for global variable 'weighted.mean' .relax.widenet.cv.elnet: no visible global function definition for 'predict' .relax.widenet.cv.elnet: no visible binding for global variable 'weighted.mean' .relax.widenet.cv.lognet: no visible global function definition for 'predict' .relax.widenet.cv.lognet: no visible binding for global variable 'weighted.mean' .widenet.cv.elnet: no visible global function definition for 'predict' .widenet.cv.elnet: no visible binding for global variable 'weighted.mean' .widenet.cv.lognet: no visible global function definition for 'predict' .widenet.cv.lognet: no visible binding for global variable 'weighted.mean' predict.widenet: no visible global function definition for 'predict' screen.cor : : no visible global function definition for 'var' screen.cor : : no visible global function definition for 'cor.test' screen.ttest: no visible global function definition for 'colttests' widenet: no visible global function definition for 'mc.reset.stream' widenet: no visible global function definition for 'mclapply' widenet: no visible global function definition for 'predict' Undefined global functions or variables: colttests cor.test mc.reset.stream mclapply packageDescription predict var weighted.mean Consider adding importFrom("stats", "cor.test", "predict", "var", "weighted.mean") importFrom("utils", "packageDescription") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [2s] OK ** running examples for arch 'x64' ... [3s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs