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| compartments | Extract the list of unique compartments for the metabolites of a set of stoichiometric reactions. |
| convert2sbml | Write a model in a SBML format. |
| convert2sbmlR | Convert a data.frame data to a SBMLR object |
| getChEBI | Download the ChEBI database |
| isBalanced | Evaluate the mass or charge balance for a set of stoichiometric reactions |
| isValidSyntax | Evaluate if a stoichiometric reaction has a valid syntax |
| mapReactions | Return reactions from a reference data.frame by a selected column |
| metabolites | Identify the list of metabolites for a set of stoichiometric reactions |
| orphanProducts | Identify the orphan products of a set of stoichometric reactions |
| orphanReactants | Identify the orphan reactants of a set of stoichometric reactions |
| products | Identify the products of a stoichometric reaction |
| reactants | Identify the reactants of a stoichometric reaction |
| stoichiometricMatrix | Return the stoichiometric matrix for a set of stoichiometric reactions |
| writeTSVmod | Write a model in a TSV format for the 'sybil' R package. |
| xls2sbml | Write a model in SBML format from a XLS spreadsheet |