Calculating Proportionality Between Vectors of Compositional Data


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Documentation for package ‘propr’ version 2.0.4

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caneToad.counts Example Cane Toad Count Data
caneToad.groups Example Cane Toad Group Data
dendrogram The propr Package
mds Make MDS Plot
perb Calculate proportionality metric rho.
phit Calculate proportionality metric phi.
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propr The propr Package
propr-class An S4 class to hold results from proportionality analysis.
proprALR Calculates the additive log-ratio transformation.
proprCLR Calculates the centered log-ratio transformation.
proprPairs Recasts proportionality matrix as a table of feature pairs.
proprPerb Calculate proportionality metric rho (Erb 2016).
proprPhit Calculate proportionality metric phi (Lovell 2015).
proprSym Symmetrizes a proportionality matrix.
proprTri Retrieve the lower left triangle of a proportionality matrix.
proprVLR Calculates the variance of the log of the ratios.
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