bokeh | Make Bokeh Plot |
bucket | Make Bucket Plot |
caneToad.counts | Example Cane Toad Count Data |
caneToad.groups | Example Cane Toad Group Data |
dendrogram | The propr Package |
mds | Make MDS Plot |
perb | Calculate proportionality metric rho. |
phit | Calculate proportionality metric phi. |
plot-method | The propr Package |
plotCheck | Plot Check |
prism | Make Prism Plot |
propr | The propr Package |
propr-class | An S4 class to hold results from proportionality analysis. |
proprALR | Calculates the additive log-ratio transformation. |
proprCLR | Calculates the centered log-ratio transformation. |
proprPairs | Recasts proportionality matrix as a table of feature pairs. |
proprPerb | Calculate proportionality metric rho (Erb 2016). |
proprPhit | Calculate proportionality metric phi (Lovell 2015). |
proprSym | Symmetrizes a proportionality matrix. |
proprTri | Retrieve the lower left triangle of a proportionality matrix. |
proprVLR | Calculates the variance of the log of the ratios. |
show-method | The propr Package |
simplify | Simplify Indexed Matrix |
slate | Build 'propr' Table |
snapshot | Make Snapshot Plot |
subset-method | The propr Package |
top | Example propr Object |
[-method | The propr Package |